Protein Alignment CG4612 and Syncrip

DIOPT Version :9

• Sequence 1: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: NP_001382580.1
• Gene: Syncrip / 363113
• RGDID: 1305683
• Length: 623
• Species: Rattus norvegicus
• Alignment Length: 202
• Identity: 44/202 - (21%)
• Similarity: 96/202 - (47%)
• Gaps: 15/202 - (7%)

  Fly   112 SGKIYIKNLERSIDNKAVYDTFSVFGNILNCNV---AKDEDGNSRGYGFVHF-DSEEAARAAIEK 172
            :.::::.::.:|...:.:.:.||.....|...:   ..|:...:||:.|:.: |.:.||:|....
  Rat   242 NNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQARRRL 306

  Fly   173 VNGMLCNNQKVHVVKFI-PRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHKLML 236
            ::|.:.....|..|::. |..|.:.|.....|.|:|:||:...||:.|.:.|..:|::...|.:.
  Rat   307 MSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLERVKKLK 371

  Fly   237 DEEGRSRRFGFVAYENPQSALAAVIGLHGKQL-GDNKFLYVARALSKAERQQEINRKLEERKRQK 300
            |       :.|:.::....|:.|:..::||.| |:|..:..|:...:..::::..|  :..|.|.
  Rat   372 D-------YAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR--QAAKNQM 427

  Fly   301 AGQIFYY 307
            ....:||
  Rat   428 YDDYYYY 434

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	14/73 (19%)
		RRM3_I_PABPs	202..282	CDD:240826	21/80 (26%)
Syncrip	NP_001382580.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910