DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4612 and crp79

DIOPT Version :9

Sequence 1:	NP_001246493.1	Gene:	CG4612 / 37914	FlyBaseID:	FBgn0035016	Length:	307	Species:	Drosophila melanogaster
Sequence 2:	NP_001018242.1	Gene:	crp79 / 3361521	PomBaseID:	SPAC1610.03c	Length:	710	Species:	Schizosaccharomyces pombe

Alignment Length:	201	Identity:	54/201 - (26%)
Similarity:	94/201 - (46%)	Gaps:	20/201 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly   107 NSSPDSGKIYIKNLERSI--DNKAVYDTFSVFGNILNCNVA-KDEDGNSRGYGFVHFDSEEAARA 168
            ||..|...:|:|||:.::  ....:.|.||.||:||:..:| ....|.|:|||||.|...|||..
pombe   376 NSPIDPSNLYVKNLDDTVITCKSQLEDLFSPFGSILSSMLACYPNSGISKGYGFVAFRQIEAAVR 440

  Fly   169 AIEKVNGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 233
            |.:.:|||:...:::.|.....:.||.:.....|.|   |..||:..:|..:.:|....|.::..
pombe   441 AKDTLNGMMVGKKRIFVCFAERKSDRIRRLQAFFAN---KPTSEQTAQQDNKALFVKPERSSTVT 502

  Fly   234 LMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKLEERKR 298
            :....|..:.:..    |||.:..:.|...:..:.|:||        ..::..:.:|.|.|  .:
pombe   503 IRKPIESSTNKIS----ENPTTLSSKVENKNEPKTGENK--------EPSQTNEYVNCKQE--NK 553

  Fly   299 QKAGQI 304
            :.:||:
pombe   554 ELSGQL 559

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	27/72 (38%)
CG4612	NP_001246493.1	RRM3_I_PABPs	202..282	CDD:240826	16/79 (20%)
crp79	NP_001018242.1	RRM_RBM18	18..106	CDD:240801
		RRM	109..>289	CDD:223796
		RRM_SF	205..276	CDD:240668
		RRM2_I_PABPs	380..459	CDD:240825	29/78 (37%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24012
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100