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Protein Alignment CG4612 and pabpc1l
DIOPT Version :9
Sequence 1: | NP_001246493.1 |
Gene: | CG4612 / 37914 |
FlyBaseID: | FBgn0035016 |
Length: | 307 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_956133.1 |
Gene: | pabpc1l / 327625 |
ZFINID: | ZDB-GENE-030131-5836 |
Length: | 620 |
Species: | Danio rerio |
Alignment Length: | 191 |
Identity: | 96/191 - (50%) |
Similarity: | 132/191 - (69%) |
Gaps: | 5/191 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 113 GKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVNGML 177
|.|:|||::.||||||:|||||.|||||:|.|..||:| |:|||||||:::|||..|||.:||||
Zfish 99 GNIFIKNMDESIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAANRAIETMNGML 162
Fly 178 CNNQKVHVVKFIPRRDREQE---KATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHKLMLDEE 239
.|::||.|..|..|::||.| ||..|.|:|:||..|:...:.|:.:|..:|:..|..:|.||.
Zfish 163 LNDRKVFVGHFKSRKEREAEMGAKAVEFTNVYIKNFGEDIDSEKLKNIFTEFGKTLSVCVMTDER 227
Fly 240 GRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKLEERKRQK 300
||||.||||.:.|...|..||..::||:| :.:.|||.||..:.|||.|:.||.|:.|:::
Zfish 228 GRSRGFGFVNFVNHGDARRAVTEMNGKEL-NGRVLYVGRAQKRLERQGELKRKFEQIKQER 287
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1027234at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000294 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_100425 |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR24012 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
6 | 5.920 |
|
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