Protein Alignment CG4612 and syncripl

DIOPT Version :9

• Sequence 1: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: NP_955973.1
• Gene: syncripl / 324384
• ZFINID: ZDB-GENE-030131-3104
• Length: 560
• Species: Danio rerio
• Alignment Length: 298
• Identity: 56/298 - (18%)
• Similarity: 100/298 - (33%)
• Gaps: 105/298 - (35%)

  Fly   102 GGSGGNSSPDSG-KIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDE-DGNSRGYGFVHFDSEE 164
            |.:.....|..| :|::..:.|.:....:...|...|.|.:..:..|. .|.:|||.||.|.::|
Zfish   151 GSTHAGVQPTIGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLSGLNRGYAFVTFCTKE 215

  Fly   165 AARAAIEKVNGMLCNNQKVHVVKFI---------------------------------------- 189
            ||:.|::     ||||.::...|.|
Zfish   216 AAQKAVK-----LCNNNEIRPGKHIGVCISVANNRLFVGSIPKSKTKDQIVEEFAKVTEGLNDVI 275

  Fly   190 --------------------------------------------------PRRDREQEKATHFKN 204
                                                              |..|.:.|.....|.
Zfish   276 LYHQPDDKKKNRGFCFLGYEDHKTAAQARRRLMSGKVKVWGNVVTVEWADPIEDPDPEVMAKVKV 340

  Fly   205 LYVKNLSEEFTEQHLREMFEPYGRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLG 269
            |:|:||:...||:.|.:.|..:|::...|.:.|       :.|:.:|....|:.|:..||||.|
Zfish   341 LFVRNLASTVTEELLEKTFCQFGKLERVKKLKD-------YAFIHFEERDGAVKALAELHGKDL- 397

  Fly   270 DNKFLYVARALSKAERQQEINRKLEERKRQKAGQIFYY 307
            :.:.:.:..|....::::|...:.:..|.|...:.:||
Zfish   398 EGEPIEIVFAKPPDQKRKERKAQRQAAKTQMYDEYYYY 435

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	21/70 (30%)
		RRM3_I_PABPs	202..282	CDD:240826	22/79 (28%)
syncripl	NP_955973.1	RRM1_hnRNPQ	162..240	CDD:240927	24/82 (29%)
		RRM_SF	242..326	CDD:302621	0/83 (0%)
		RRM3_hnRNPR	338..409	CDD:240938	22/78 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910