Protein Alignment CG4612 and U2af2

DIOPT Version :9

• Sequence 1: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: XP_003748811.1
• Gene: U2af2 / 308335
• RGDID: 1310690
• Length: 475
• Species: Rattus norvegicus
• Alignment Length: 209
• Identity: 43/209 - (20%)
• Similarity: 83/209 - (39%)
• Gaps: 48/209 - (22%)

  Fly   105 GGNSSPDSGKIYIKNLERSIDNKAVYDTFSVF----------GN-ILNCNVAKDEDGNSRGYGFV 158
            |...:..:.::|:.|:...|..:|:.|.|:..          || :|...:.:|     :.:.|:
  Rat   141 GSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQD-----KNFAFL 200

  Fly   159 HFDSEEAARAAIEKVNGMLCNNQKVHVVKFIPRRDREQE----------------------KATH 201
            .|.|.:....|: ..:|::...|.:.:     ||..:.:                      .:.|
  Rat   201 EFRSVDETTQAM-AFDGIIFQGQSLKI-----RRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAH 259

  Fly   202 FKNLYVKNLSEEFTEQHLREMFEPYGRITSHKLMLDE-EGRSRRFGFVAYENPQSALAAVIGLHG 265
              .|::..|.....:..::|:...:|.:.:..|:.|. .|.|:.:.|..|.:......|:.||:|
  Rat   260 --KLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNG 322

  Fly   266 KQLGDNKFLYVARA 279
            .||||.|.| |.||
  Rat   323 MQLGDKKLL-VQRA 335

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	16/80 (20%)
		RRM3_I_PABPs	202..282	CDD:240826	23/79 (29%)
U2af2	XP_003748811.1	U2AF_lg	63..474	CDD:273727	43/209 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910