Protein Alignment CG4612 and Rbfox3

DIOPT Version :9

• Sequence 1: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: XP_038941605.1
• Gene: Rbfox3 / 287847
• RGDID: 1560070
• Length: 421
• Species: Rattus norvegicus
• Alignment Length: 104
• Identity: 30/104 - (28%)
• Similarity: 53/104 - (50%)
• Gaps: 19/104 - (18%)

  Fly   162 SEEAARAAIEKVNGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPY 226
            ::|||:.          ::|::|     |....|:::.   |.|:|.|:...|.:..||:||..:
  Rat   122 ADEAAQT----------DSQQLH-----PSDPTEKQQP---KRLHVSNIPFRFRDPDLRQMFGQF 168

  Fly   227 GRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHG 265
            |:|...:::.:|.| |:.||||.:|....|..|...|:|
  Rat   169 GKILDVEIIFNERG-SKGFGFVTFETSSDADRAREKLNG 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	4/22 (18%)
		RRM3_I_PABPs	202..282	CDD:240826	23/64 (36%)
Rbfox3	XP_038941605.1	ELAV_HUD_SF	<71..216	CDD:273741	30/104 (29%)
		RRM_FOX1_like	145..220	CDD:409841	23/63 (37%)
		Fox-1_C	254..392	CDD:403573

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910