Protein Alignment CG4612 and Elavl2

DIOPT Version :9

• Sequence 1: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: NP_001289146.1
• Gene: Elavl2 / 286973
• RGDID: 628611
• Length: 388
• Species: Rattus norvegicus
• Alignment Length: 181
• Identity: 52/181 - (28%)
• Similarity: 91/181 - (50%)
• Gaps: 15/181 - (8%)

  Fly    97 ASGSTGGSGGNSSP-DSG-------KIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDE-DGNS 152
            |:|.|..:...||| |||       .:.:..|.:::..:.:...|...|.|.:|.:.:|: .|.|
  Rat    44 ANGPTTVNNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQS 108

  Fly   153 RGYGFVHFDSEEAARAAIEKVNGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQ 217
            .|||||::...:.|..||..:||:....:.:.|     ...|....:....||||..|.:..|::
  Rat   109 LGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKV-----SYARPSSASIRDANLYVSGLPKTMTQK 168

  Fly   218 HLREMFEPYGRITSHKLMLDE-EGRSRRFGFVAYENPQSALAAVIGLHGKQ 267
            .|.::|..||||.:.::::|: .|.||..||:.::....|..|:.||:|::
  Rat   169 ELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQK 219

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	18/70 (26%)
		RRM3_I_PABPs	202..282	CDD:240826	23/67 (34%)
Elavl2	NP_001289146.1	ELAV_HUD_SF	65..387	CDD:273741	43/160 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910