Protein Alignment CG4612 and rnp24

DIOPT Version :10

• Sequence 1: NP_611924.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: NP_594970.1
• Gene: rnp24 / 2542965
• PomBaseID: SPAC3G6.04
• Length: 369
• Species: Schizosaccharomyces pombe
• Alignment Length: 178
• Identity: 38/178 - (21%)
• Similarity: 78/178 - (43%)
• Gaps: 44/178 - (24%)

  Fly   144 VAKDEDGNSRGYGFVHFDSEEAARAAIEKVNGMLCNNQKVH----VVK----FIPRRDR------ 194
            ::|::...::|:.:|.|.:|:|.:.|::      |:.:.::    ::|    |..|..:
pombe   156 MSKEKRFQNKGFAYVDFATEDALKLALQ------CSEKALNGRNILIKSNTDFSGRPSKPANTLS 214

  Fly   195 -----EQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHKLM-LDEEGRSRRFGFVAYENP 253
                 :..|......|:|.||..|.|:..|:|.|...|:|...:|| .::.|:.:.||||.:.:.
pombe   215 KTASIQSSKKEPSSILFVGNLDFETTDADLKEHFGQVGQIRRVRLMTFEDTGKCKGFGFVDFPDI 279

  Fly   254 QSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKLEERKRQKA 301
            .:.:.|:      :||.|.:            :.|......:|.|.|:
pombe   280 DTCMKAM------ELGHNSW------------RLEYGEDRSKRMRNKS 309

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_611924.1	PABP-1234	115..>303	CDD:130689	38/178 (21%)
rnp24	NP_594970.1	RRM1_Nop13p_fungi	107..199	CDD:409830	9/48 (19%)
		RRM2_Nop13p_fungi	230..299	CDD:409831	23/86 (27%)