DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4612 and SPAC328.05

DIOPT Version :9

Sequence 1:	NP_001246493.1	Gene:	CG4612 / 37914	FlyBaseID:	FBgn0035016	Length:	307	Species:	Drosophila melanogaster
Sequence 2:	NP_594207.3	Gene:	SPAC328.05 / 2542567	PomBaseID:	SPAC328.05	Length:	464	Species:	Schizosaccharomyces pombe

Alignment Length:	223	Identity:	53/223 - (23%)
Similarity:	90/223 - (40%)	Gaps:	48/223 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly    67 RH--GHNSLGSG------HTSTSSHSANVGVGVGGGALASGSTGGSGGNSSPDSGKIYIKNLERS 123
            ||  |.|||..|      ||....|.                  |:|...:....::|:.||...
pombe    41 RHVNGSNSLKRGLHFDGEHTERDPHL------------------GNGQKYTQQERRVYVGNLSYQ 87

  Fly   124 IDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVNGMLCNNQKVHVVKF 188
            :....:.:.....||:|||.:....:|.|:|...:.:.:.|.||.||:.::......:.|::
pombe    88 VRWFELKEFMGQVGNVLNCEILNLPNGLSKGCAIIEYSTAEEARTAIKTLSNQKFMGRLVYI--- 149

  Fly   189 IPRRDREQ-----------------EKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHKLML 236
              |.||||                 :.:...:.|:|.||......|.|:::|...|.:....:.:
pombe   150 --REDREQNARFGSSSVSPSASSNGKDSEPDRQLFVGNLPYNVRWQDLKDLFRQAGSVIRADIQM 212

  Fly   237 DEEGRSRRFGFVAYENPQSALAAVIGLH 264
            ::|||||..|.|...:.:.|:.|:..||
pombe   213 NQEGRSRGIGIVVMSSMKEAMHAIQMLH 240

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	17/69 (25%)
CG4612	NP_001246493.1	RRM3_I_PABPs	202..282	CDD:240826	19/63 (30%)
SPAC328.05	NP_594207.3	RRM	71..387	CDD:223796	41/175 (23%)
		RRM_SF	79..150	CDD:240668	17/75 (23%)
		RRM3_hnRNPM_like	181..252	CDD:240833	19/60 (32%)
		RRM_SF	312..385	CDD:302621
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910