Protein Alignment CG4612 and hrpa-2

DIOPT Version :9

• Sequence 1: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: NP_741783.1
• Gene: hrpa-2 / 180791
• WormBaseID: WBGene00019249
• Length: 336
• Species: Caenorhabditis elegans
• Alignment Length: 216
• Identity: 50/216 - (23%)
• Similarity: 95/216 - (43%)
• Gaps: 36/216 - (16%)

  Fly   107 NSSPDSGKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDED-GNSRGYGFVHFDSEEAARAAI 170
            :|.|...|::|..|.....::.:.:.||.:|.:::..|.:|.: .:|||:|||.|.|..:|.:|:
 Worm    64 DSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 128

  Fly   171 ----EKVNGMLCNNQKVHVVKFIPRRDR---------EQEKATHFKNLYVKNLSEEFTEQHLREM 222
                .|:.|...::::.     |||...         |.:.|...|.|.....:...:...||..
 Worm   129 NDRPHKLGGKTVDSKRA-----IPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVY 188

  Fly   223 FEPYGRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGD-------------NKFL 274
            ||.:|.:...:::    |:.|..|||.||:.:||...:....|:.:.:             |...
 Worm   189 FETFGTLDQVEIL----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHPNGST 249

  Fly   275 YVARALSKAERQQEINRKLEE 295
            |..|..|::..|:::..:|.:
 Worm   250 YWKRPQSQSHSQRDLFEQLSQ 270

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	19/74 (26%)
		RRM3_I_PABPs	202..282	CDD:240826	20/92 (22%)
hrpa-2	NP_741783.1	RRM	<62..230	CDD:223796	44/174 (25%)
		RRM1_hnRNPA_like	71..148	CDD:241022	21/81 (26%)
		RRM_SF	183..240	CDD:302621	15/60 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910