Protein Alignment CG4612 and sup-26

DIOPT Version :9

• Sequence 1: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: NP_001254892.1
• Gene: sup-26 / 175551
• WormBaseID: WBGene00006331
• Length: 476
• Species: Caenorhabditis elegans
• Alignment Length: 357
• Identity: 77/357 - (21%)
• Similarity: 143/357 - (40%)
• Gaps: 82/357 - (22%)

  Fly    12 PANYHQQQP---------ALNHHTLAAAHHQQQLHHHAAAAG----------HLSHVGGGHAASN 57
            |...:.|||         .|.|::.::..||...|:|::::.          |.|.....|..|.
 Worm     3 PTAQNSQQPYPRSDKAGGHLLHYSSSSHQHQNHQHYHSSSSNQQFNRPPPPPHNSQHHHHHNNSR 67

  Fly    58 HLAAAAVL---------------------GRHGHNSLGSGHTSTSSHSANVGVGVGGGALASGST 101
            ..|::|..                     .:|.:......|....:|..      |.|..  |::
 Worm    68 MNASSAPQQQQQQQQPQQGQAPQQQQQGPPQHQYQQQRPFHGRVQNHMR------GSGPF--GNS 124

  Fly   102 GGSGGNSSP------------DSGKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDE-DGNSR 153
            .|.|..::|            .|..:||:.|..:.::..:.:..|.:|||.:.....|: ..|.:
 Worm   125 NGYGRYTAPRGDQQHHDSTPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCK 189

  Fly   154 GYGFVHFDSEEAARAAIEKVN--GMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTE 216
            |||||.|:|.:||.||::.:|  |:.....|:        :.:||:..    |||:.||..:|||
 Worm   190 GYGFVDFESPQAAAAAVDGLNTEGVQAQMAKL--------QQQEQDPT----NLYIANLPLDFTE 242

  Fly   217 QHLREMFEPYGRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLG----DNKFLYVA 277
            |.|......:|.:.|.:::...:.:||..||...::.:.....:..|:|.:..    :...|.:.
 Worm   243 QMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNGGRFDTMSKEGPALLIK 307

  Fly   278 RALSKAERQQEINRKLEERKRQKAGQIF--YY 307
            :|.:..:.:..:|.. |..:|.:..|::  ||
 Worm   308 QADTGRKSKHSMNNP-EMLQRMQYPQVYQSYY 338

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	23/72 (32%)
		RRM3_I_PABPs	202..282	CDD:240826	20/83 (24%)
sup-26	NP_001254892.1	RRM1_MSSP	148..218	CDD:240689	22/69 (32%)
		RRM2_MSSP	229..310	CDD:240690	19/84 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910