Protein Alignment CG4612 and Elavl4

DIOPT Version :9

• Sequence 1: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: XP_006502856.1
• Gene: Elavl4 / 15572
• MGIID: 107427
• Length: 397
• Species: Mus musculus
• Alignment Length: 233
• Identity: 57/233 - (24%)
• Similarity: 109/233 - (46%)
• Gaps: 22/233 - (9%)

  Fly    91 VGGGALASGSTGGSGGN----------SSPDSGK--IYIKNLERSIDNKAVYDTFSVFGNILNCN 143
            |..|..::.|.|.|..|          ::.|..|  :.:..|.:::..:.....|...|.|.:|.
Mouse    29 VSNGPTSNTSNGPSSNNRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCK 93

  Fly   144 VAKDE-DGNSRGYGFVHFDSEEAARAAIEKVNGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYV 207
            :.:|: .|.|.|||||::...:.|..||..:||:....:.:.|     ...|....:....||||
Mouse    94 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKV-----SYARPSSASIRDANLYV 153

  Fly   208 KNLSEEFTEQHLREMFEPYGRITSHKLMLDE-EGRSRRFGFVAYENPQSALAAVIGLHG-KQLGD 270
            ..|.:..|::.|.::|..||||.:.::::|: .|.||..||:.::....|..|:.||:| |..|.
Mouse   154 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGA 218

  Fly   271 NKFLYVARALSKAERQQE--INRKLEERKRQKAGQIFY 306
            .:.:.|..|.:.:::..:  :::..:...|:..|.:.:
Mouse   219 TEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHH 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	18/70 (26%)
		RRM3_I_PABPs	202..282	CDD:240826	27/81 (33%)
Elavl4	XP_006502856.1	ELAV_HUD_SF	60..396	CDD:273741	50/202 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910