Protein Alignment CG4612 and PABPC5

DIOPT Version :9

• Sequence 1: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: NP_543022.1
• Gene: PABPC5 / 140886
• HGNCID: 13629
• Length: 382
• Species: Homo sapiens
• Alignment Length: 207
• Identity: 91/207 - (43%)
• Similarity: 133/207 - (64%)
• Gaps: 16/207 - (7%)

  Fly   108 SSPDS-------GKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEA 165
            |.||.       |.|:||||::||||:|::..||.|||||:|.|..|::| |:||.:|||||..|
Human    94 SQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAA 157

  Fly   166 ARAAIEKVNGMLCNNQKVHVVKF-IPRRD----REQEKATHFKNLYVKNLSEEFTEQHLREMFEP 225
            |..||..:||:..||::|:|.:| .|...    |.:::|| |.|::|||:.::..::.|:|:|..
Human   158 ANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRAT-FTNVFVKNIGDDIDDEKLKELFCE 221

  Fly   226 YGRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEIN 290
            ||...|.|::.|..|:|:.||||.||..::|..||:.||||.: |.|.|||.||..|.||..|:.
Human   222 YGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSI-DGKVLYVGRAQKKIERLAELR 285

  Fly   291 RKLEE-RKRQKA 301
            |:.|. |.::|:
Human   286 RRFERLRLKEKS 297

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	38/69 (55%)
		RRM3_I_PABPs	202..282	CDD:240826	35/79 (44%)
PABPC5	NP_543022.1	PABP-1234	22..>379	CDD:130689	91/207 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG52254
OrthoDB	1	1.010	-	-		D1027234at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24012
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	4	4.030