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Protein Alignment CG4612 and ZK616.61
DIOPT Version :9
Sequence 1: | NP_001246493.1 |
Gene: | CG4612 / 37914 |
FlyBaseID: | FBgn0035016 |
Length: | 307 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001255271.1 |
Gene: | ZK616.61 / 13194041 |
WormBaseID: | WBGene00194816 |
Length: | 340 |
Species: | Caenorhabditis elegans |
Alignment Length: | 85 |
Identity: | 18/85 - (21%) |
Similarity: | 30/85 - (35%) |
Gaps: | 19/85 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 89 VGVGGGALASGSTGGSGGNSSPDSGKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSR 153
||....:|.|..|..|....|.:.| ::.:.:.|:.|. .||...:..|.
Worm 97 VGAVRESLESWRTSSSSERPSAEEG-----SMTKKVSNEVVK------------RVAVKRELPSA 144
Fly 154 GYGFVHFDSEEAA--RAAIE 171
.|..|.:|....: :|.:|
Worm 145 EYHSVRYDERNLSLRKAQVE 164
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG4612 | NP_001246493.1 |
RRM2_I_PABPs |
115..185 |
CDD:240825 |
10/59 (17%) |
RRM3_I_PABPs |
202..282 |
CDD:240826 |
|
ZK616.61 | NP_001255271.1 |
None |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR24012 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.100 |
|
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