Protein Alignment CG4612 and rbm47

DIOPT Version :9

• Sequence 1: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: NP_001135499.1
• Gene: rbm47 / 100216039
• XenbaseID: XB-GENE-976707
• Length: 412
• Species: Xenopus tropicalis
• Alignment Length: 266
• Identity: 52/266 - (19%)
• Similarity: 98/266 - (36%)
• Gaps: 85/266 - (31%)

  Fly    79 STSSHSANVGVGVGG----GALAS-------------------GSTGGSGGNSSPDSGKIYIKNL 120
            |::..::|:..||.|    .||.:                   |...|..|:..|...::::..:
 Frog    14 SSNMSTSNIPEGVAGAPNEAALINLMERTGYTMVQENGQRKYGGPPPGWEGSPPPRGCEVFVGKI 78

  Fly   121 ERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN----------G 175
            .|.:....:...|...|.|....:..|.||.:|||.||.|..:..|:.|:.::|          |
 Frog    79 PRDVYEDELVPVFESAGRIFEMRLMMDFDGKNRGYAFVMFTKKHEAKQAVRELNNYEIRPGRLLG 143

  Fly   176 MLCNNQKVHV-VKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHKLMLD-- 237
            :.|:.....: :..||:..:.:                        |:.|...::|..  :||
 Frog   144 VCCSVDNCRLFIGGIPKMKKRE------------------------EILEEISKVTEG--VLDVI 182

  Fly   238 ------EEGRSRRFGFVAYENPQSALAA-------VIGLHGKQLGDNKFLYVARALSKAERQQEI 289
                  ::.::|.|.||.||:.::|..|       .|.|.|.|:          |:..||.:.::
 Frog   183 VYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQI----------AVDWAEPEIDV 237

  Fly   290 NRKLEE 295
            :..:.|
 Frog   238 DEDVME 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	18/79 (23%)
		RRM3_I_PABPs	202..282	CDD:240826	18/94 (19%)
rbm47	NP_001135499.1	hnRNP-R-Q	13..>378	CDD:273732	52/266 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910