Protein Alignment CG4612 and msi2

DIOPT Version :9

• Sequence 1: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: XP_004911774.1
• Gene: msi2 / 100038158
• XenbaseID: XB-GENE-488852
• Length: 407
• Species: Xenopus tropicalis
• Alignment Length: 217
• Identity: 60/217 - (27%)
• Similarity: 97/217 - (44%)
• Gaps: 34/217 - (15%)

  Fly    97 ASGS--TGGSGGNSSPDSGKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKD-EDGNSRGYGFV 158
            |.||  |.||..:|..|.||::|..|.......::.|.|:.||.|..|.|.:| ....|||:|||
 Frog     3 ADGSQATSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFV 67

  Fly   159 HFDSEEAARAAIEKVNGM---LCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLR 220
            .|    |..|:::||...   ..:::.:......||| .:.:..|..|.::|..||.....:.::
 Frog    68 TF----ADPASVDKVLAQPHHELDSKTIDPKVAFPRR-AQPKMVTRTKKIFVGGLSANTVVEDVK 127

  Fly   221 EMFEPYGRITSHKLMLDE-EGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAE 284
            :.||.:|::....||.|: ..|.|.||||.:| .:..:..|..:|
 Frog   128 QYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFE-IEDVVEKVCEIH-------------------- 171

  Fly   285 RQQEINRKLEERKRQKAGQIFY 306
             ..|||.|:.|.|:.:..::.:
 Frog   172 -FHEINNKMVECKKAQPKEVMF 192

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	21/73 (29%)
		RRM3_I_PABPs	202..282	CDD:240826	19/80 (24%)
msi2	XP_004911774.1	RRM	<2..162	CDD:223796	52/164 (32%)
		RRM1_MSI	23..97	CDD:241020	21/77 (27%)
		RRM2_MSI	111..184	CDD:240769	23/94 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910