DRSC/TRiP Functional Genomics Resources

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Protein Alignment Letm1 and LETM2

DIOPT Version :10

Sequence 1:NP_611922.1 Gene:Letm1 / 37912 FlyBaseID:FBgn0284252 Length:1013 Species:Drosophila melanogaster
Sequence 2:NP_176732.2 Gene:LETM2 / 842865 AraportID:AT1G65540 Length:736 Species:Arabidopsis thaliana


Alignment Length:718 Identity:232/718 - (32%)
Similarity:364/718 - (50%) Gaps:90/718 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PRRSASTSVLELSRSLGTYRRFQPHANYGYDYSGYGFRHLHTSRTLLETSSSKIDATVKKLKNQQ 113
            |..|....:|||...|| ||..              |:.:::|  |...:....|...:|:.:|.
plant    66 PSFSNGVGILELPYPLG-YRLV--------------FQSMYSS--LATANKPDHDKKGEKVTSQT 113

  Fly   114 KEKVEEIMKEVANGQAAAVRASSAATATASSEKGQNASA------TAGSTSATASTTSLAKTADK 172
            ||...|...|...|.:.| :|.:.|.....|:|...:..      ..|...|..:..|:::   :
plant   114 KEASPEECDEAVEGLSLA-KAKAKAMKLEESQKSDISIMQRVRLFLLGIGPALRAIASMSR---E 174

  Fly   173 SVAKPKKPLRTRIWDELVHYYHGFRLLFIDVAICSKLLWRVLNGKTLTRRENKQLQRTTSDLFRL 237
            ..||..:..:......|.||:.|.:||:.||.|..:||.::.|||.|:|||.:||.|||:|:|||
plant   175 DWAKKLRHWKDEFKSTLQHYWLGTKLLWADVRISVRLLVKLANGKGLSRRERQQLTRTTADIFRL 239

  Fly   238 IPFSVFIIVPFMELLLPLFIKFFPGMLPSTFQTSTDRQEKLRQSLSVRLEVAKFLQQTLDQMPVQ 302
            :|.:|||||||||.|||:|:|.||.|||||||.....:|.|::.|:.|:|.|||||.|:.:|..:
plant   240 VPVAVFIIVPFMEFLLPVFLKLFPNMLPSTFQDKMKEEEALKRRLNARMEYAKFLQDTVKEMAKE 304

  Fly   303 HKEHSSEE----AKQFEAFFTKIRNPTEPVSNDEIIKFAKRFDDEITLDSLSREQLAALCRVLEL 363
            .:...|.|    |:..:.|.||:|... .||||||:.|||.|:||:|||:::|.:|..:|:.:.:
plant   305 VQTSRSGEIKKTAEDLDGFMTKVRRGV-GVSNDEILGFAKLFNDELTLDNINRSRLVNMCKYMGI 368

  Fly   364 NTIGTTTLLRFQLRLKLRSLATDDRVIAREGVDSLDLLELQQACKARGMRAYGLTEERLRFQLKE 428
            :..||...||:.||.:|:.:..||::|..|||:||...||:|||:.|||...|..|| :|.||.:
plant   369 SPFGTDAYLRYMLRKRLQEIKKDDKLIKAEGVESLSEAELRQACRERGMLQLGSVEE-MREQLVD 432

  Fly   429 WIDLSLNEQVPPTLLLLSRTMLISDDSITTDKLKETIRVLP----DAVGAHTRHAIGESEGKVDN 489
            |:|||||..||.:||:|||:..::......:.::.|:..||    |.||.   .|:...:...:.
plant   433 WLDLSLNHSVPSSLLILSRSFSMAGKLKPEEAVQATLSSLPDEVVDTVGV---TALSSEDSVSER 494

  Fly   490 KTKIEIIKEEERKIREEREEEREETIAKRSAIKEEIPAPYVFAEKLSGSQDL-LDHKEQSSVSET 553
            |.|:|.::.:|..|:||.|||.|| :||             ..|..|..:|: ||....|:..:.
plant   495 KRKLEYLEMQEELIKEEEEEEEEE-MAK-------------MKESASSQKDVALDEMMASTAKDA 545

  Fly   554 DKGISSTDVQL------LSEALKTLSSDKQLVVEKET-IKELKEELADYK--------EDVEELR 603
            ::...:..::.      ||.||..|:|...:.:|:|. :|.:|:|:..|.        :|.|:.|
plant   546 NEQAKAKTLEKHEQLCELSRALAVLASASSVSMEREEFLKLVKKEVDLYNSMVEKGGTDDEEDAR 610

  Fly   604 EVRQVVKEPVRES-------RAAKLLYNRVNKMISQLDNVLNDLEARQHQIKQAESSDYAASSPT 661
            :.....:|....|       :.:..|.:||..|:.:|:..::|::.:.....:....||...   
plant   611 KAYLAAREDSDRSAQKAIADKTSSALLDRVETMLQKLEKEIDDVDNKIGNRWRLLDRDYDGK--- 672

  Fly   662 VEPQQMVHIDELVATIRRMKEASDEERFKVVGDLLVKLDADKDGVISVNEITKAVQSI-DREATN 725
            |.|      ||:......:|:...:|.   :.:|:..|..||||.|.|.::.|....| |.||..
plant   673 VSP------DEVALAAMYLKDTLGKEG---IQELIQNLSKDKDGKILVEDLVKLASEIEDAEAEE 728

  Fly   726 IDK 728
            .|:
plant   729 TDE 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Letm1NP_611922.1 LETM1_RBD 219..450 CDD:462258 116/234 (50%)
PRK03918 <543..>916 CDD:235175 47/209 (22%)
LETM2NP_176732.2 LETM1_RBD 221..453 CDD:462258 116/233 (50%)
EF-hand_7 655..719 CDD:463900 17/75 (23%)

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