DRSC/TRiP Functional Genomics Resources

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Protein Alignment Letm1 and Letm1

DIOPT Version :10

Sequence 1:NP_611922.1 Gene:Letm1 / 37912 FlyBaseID:FBgn0284252 Length:1013 Species:Drosophila melanogaster
Sequence 2:NP_062668.1 Gene:Letm1 / 56384 MGIID:1932557 Length:738 Species:Mus musculus


Alignment Length:734 Identity:272/734 - (37%)
Similarity:413/734 - (56%) Gaps:130/734 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 KGQNASATAGSTSATASTTSLAKTADKS------VAKP------KKPLRTRIWDELVHYYHGFRL 198
            :|.::|:..|..|....:....|..:|.      |..|      :|.|..::.|||.||||||||
Mouse   105 RGWHSSSPLGEDSVIEKSLKSLKDKNKKLEEGGPVYSPPAQVVVRKSLGQKVLDELRHYYHGFRL 169

  Fly   199 LFIDVAICSKLLWRVLNGKTLTRRENKQLQRTTSDLFRLIPFSVFIIVPFMELLLPLFIKFFPGM 263
            |:||..|.:::|||:|||.||||||.:|..|..:|||||:||.||::|||||.|||:.:|.||.|
Mouse   170 LWIDTKIAARMLWRILNGHTLTRRERRQFLRICADLFRLVPFLVFVVVPFMEFLLPVVVKLFPNM 234

  Fly   264 LPSTFQTSTDRQEKLRQSLSVRLEVAKFLQQTLDQMPVQHKEHSSEEAKQFEAFFTKIRNPTEPV 328
            |||||:|.:.::|:|::.|.|:||:|||||.|:::|.:::|.......|.|.|||.|||...|..
Mouse   235 LPSTFETQSIKEERLKKELRVKLELAKFLQDTIEEMALKNKAAKGNATKDFSAFFQKIRETGERP 299

  Fly   329 SNDEIIKFAKRFDDEITLDSLSREQLAALCRVLELNTIGTTTLLRFQLRLKLRSLATDDRVIARE 393
            ||:||::|:|.|:||:|||:|:|.||.|||::|||.:|||...|||||.::|||:..||::|:.|
Mouse   300 SNEEIMRFSKLFEDELTLDNLTRPQLVALCKLLELQSIGTNNFLRFQLTMRLRSIKADDKLISEE 364

  Fly   394 GVDSLDLLELQQACKARGMRAYGLTEERLRFQLKEWIDLSLNEQVPPTLLLLSRTMLISDDSITT 458
            |||||.:.|||.||:||||||.|:||:||:.|||:|:||.|:.::|.:||:|||.|.:.|.....
Mouse   365 GVDSLTVKELQAACRARGMRALGVTEDRLKGQLKQWLDLHLHHEIPTSLLILSRAMYLPDTLSPA 429

  Fly   459 DKLKETIRVLPDAVGAHTRHAIGESEG-KVDNKTKIEIIKEEERKIREEREEEREETIAKRSAIK 522
            |:||.|::.||:.|....:..:.|.|| |||||.|:|...:||..|::|..||.:........|:
Mouse   430 DQLKSTLQTLPEIVAKEAQVKVAEVEGEKVDNKAKLEATLQEEAAIQQEHLEELKRASEAVKDIQ 494

  Fly   523 EEI------------PAPYVFAEKLSGSQDLLDHKEQSSVSETDKG--ISSTDVQLLSEALKTLS 573
            .|:            |.|.| .:.:..|:.|.|   .:.|.|..||  |:..::.:||:|...|.
Mouse   495 PEVAEATLPGRPGPEPQPPV-DDVILPSEVLTD---TAPVLEGLKGEEITKEEIDILSDACSKLQ 555

  Fly   574 SDKQ-LVVEKETIKELKEELADYKEDVEEL-REVRQVVKEP-VRESRAAKLLYNRVNKMISQLDN 635
            ..|: |..|||.::.|||::.||.||::|: :|:.:..:|. :.||.|:|.|..||.:||.|:|.
Mouse   556 EQKKSLTKEKEELELLKEDVQDYSEDLQEIKKELSKTGEEKYIEESAASKRLSKRVQQMIGQIDG 620

  Fly   636 VLNDLEARQHQIKQAESSDYAASSPTVEPQQMVHIDELVATIRRMKEASDEERFKVVGDLLVKLD 700
            ::..||..|...|...|.    |:||.|                                     
Mouse   621 LITQLETTQQDGKLGPSQ----STPTGE------------------------------------- 644

  Fly   701 ADKDGVISVNEITKAVQSIDREATNIDKKQLEEFTELLSKLASRRRHEEIVHIDDLMNNIKVLKE 765
                .|||:                         |||:|.:      ::|.||.:    .|::..
Mouse   645 ----SVISI-------------------------TELISAM------KQIKHIPE----HKLISL 670

  Fly   766 TSDEARLKHIEAVLEKFDADKDGVVTVNDIRKVLESIGRDNIKLSDKAIEELISLLDKEQVLQAE 830
            ||             ..|.:|||.:.::|:.||::.:.::::::|...:.|:::.|:||:  :.|
Mouse   671 TS-------------ALDDNKDGNINIDDLVKVIDLVNKEDVQISTTQVAEIVATLEKEE--KIE 720

  Fly   831 QKIEKAIAKSMKEAEKLKS 849
            :| |||..|:.|||.::|:
Mouse   721 EK-EKAKEKAEKEAAEVKN 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Letm1NP_611922.1 LETM1_RBD 219..450 CDD:462258 128/230 (56%)
PRK03918 <543..>916 CDD:235175 80/312 (26%)
Letm1NP_062668.1 LETM1_RBD 190..421 CDD:462258 124/230 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 719..738 3/18 (17%)

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