DRSC/TRiP Functional Genomics Resources

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Protein Alignment Letm1 and Letm2

DIOPT Version :10

Sequence 1:NP_611922.1 Gene:Letm1 / 37912 FlyBaseID:FBgn0284252 Length:1013 Species:Drosophila melanogaster
Sequence 2:XP_006509186.1 Gene:Letm2 / 270035 MGIID:2444979 Length:516 Species:Mus musculus


Alignment Length:348 Identity:152/348 - (43%)
Similarity:229/348 - (65%) Gaps:4/348 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 TAGSTSATASTTSLAKTADKSVAKPKKPLRTRIWDELVHYYHGFRLLFIDVAICSKLLWRVLNGK 217
            |....:|:...|..|||   ...:.|:.||.:|.:||.:||.||.||:||..:.::::||:|:|.
Mouse    95 TGKPKAASPQPTKEAKT---ETTEEKRSLRQKIVNELKYYYKGFSLLWIDTKVAARIVWRLLHGN 156

  Fly   218 TLTRRENKQLQRTTSDLFRLIPFSVFIIVPFMELLLPLFIKFFPGMLPSTFQTSTDRQEKLRQSL 282
            .|||||.::|.||.:|:|||:||.|||||||||.|:|:|:|.||.||||||::.:.::||.::::
Mouse   157 ALTRRERRRLLRTCADVFRLVPFMVFIIVPFMEFLIPVFLKLFPDMLPSTFESESKKEEKQKKTM 221

  Fly   283 SVRLEVAKFLQQTLDQMPVQHKEHSSEEAKQFEAFFTKIRNPTEPVSNDEIIKFAKRFDDEITLD 347
            :.:||:|||||:|:.:|..:::....:.:.|..::..:::...:| |..||::|:|.|.|::.|:
Mouse   222 AAKLEIAKFLQETMTEMARRNRAKLGDASSQLSSYVKQVQTGHKP-STKEIVRFSKLFKDQLALE 285

  Fly   348 SLSREQLAALCRVLELNTIGTTTLLRFQLRLKLRSLATDDRVIAREGVDSLDLLELQQACKARGM 412
            .|.|.||.|||::|||.|.||..||||||.:.|:|:..||.:||:|||.:|.:.|||.||:||||
Mouse   286 HLDRPQLVALCKLLELQTFGTNNLLRFQLLMTLKSIKADDEIIAKEGVKALSVSELQSACRARGM 350

  Fly   413 RAYGLTEERLRFQLKEWIDLSLNEQVPPTLLLLSRTMLISDDSITTDKLKETIRVLPDAVGAHTR 477
            |:.|||||:|..||..|:||.|.|.|||:|||||||..:.|......:|...|......:|..|.
Mouse   351 RSLGLTEEQLCQQLTGWLDLHLKENVPPSLLLLSRTFYLIDVKPKPIELPPNIETPKPNLGIPTP 415

  Fly   478 HAIGESEGKVDNKTKIEIIKEEE 500
            ......|...|:..:::..|:||
Mouse   416 PPPESKENLTDSAPQLKGTKDEE 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Letm1NP_611922.1 LETM1_RBD 219..450 CDD:462258 118/230 (51%)
PRK03918 <543..>916 CDD:235175
Letm2XP_006509186.1 LETM2_N 1..109 CDD:466042 3/13 (23%)
LETM1_RBD 171..388 CDD:462258 110/217 (51%)
Blue background indicates that the domain is not in the aligned region.

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