DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and PRE1

DIOPT Version :9

Sequence 1:NP_001286844.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_010928.1 Gene:PRE1 / 856731 SGDID:S000000814 Length:198 Species:Saccharomyces cerevisiae


Alignment Length:196 Identity:39/196 - (19%)
Similarity:85/196 - (43%) Gaps:11/196 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 VMGLRTNNAIVIGVEK---RSVGDLQEERMVRKICMLDDHVVMTFSGLTADARILVSRAQMEAQS 95
            ::|:|..:::::...|   |.:..|::..  .|...|..|.:|:|:|...|........|...|.
Yeast     4 ILGIRVQDSVILASSKAVTRGISVLKDSD--DKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQL 66

  Fly    96 HRLNFEKPTTVEYITRYIAQLKQNYTQS-NGRRPFGLSCLVGGFD-EDGTPHLFQTDPSGIFYEW 158
            :.:..:...:.:.::.::   :|...:| ..|||:.::.|:||:| :...|.|:|.|..|...|.
Yeast    67 YSIREDYELSPQAVSSFV---RQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLGTKVEL 128

  Fly   159 RANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHIVRTLVSVSSLNHTQMEVAVLKYRQPLRMI 223
            .....|.|.......::.|....:|..:....:|..|:.|.....::...:.|.::. :..:|.:
Yeast   129 PYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVIVKIVD-KDGIRQV 192

  Fly   224 D 224
            |
Yeast   193 D 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_001286844.1 arc_protsome_A 5..215 CDD:163366 37/185 (20%)
Ntn_hydrolase 5..214 CDD:294319 37/184 (20%)
PRE1NP_010928.1 proteasome_beta_type_2 1..194 CDD:239727 39/196 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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