DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and PAE1

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_175788.1 Gene:PAE1 / 841822 AraportID:AT1G53850 Length:237 Species:Arabidopsis thaliana


Alignment Length:249 Identity:39/249 - (15%)
Similarity:79/249 - (31%) Gaps:66/249 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 ERWKNACSIAERYMTLALSERIASFDHEVKLELARHKVMRHRMAIEGRIKNGAS----------- 389
            |..:..|.|......|.:.:.|.|...:|.:...      |...:.|..|:|.|           
plant    73 EHLEAKCGIDGLKPHLLIQDFICSVTQDVGINYT------HPQNLPGVSKDGTSVFFFNKTAHAY 131

  Fly   390 ----QKMPALLPSDNSEVLEHWNKRDRSSSPESPEYELLPGVFPTKNNPIKKIK---------FS 441
                :|...:.|:...:....|:|..::..      .:|.|:    ....|||.         |.
plant   132 QNGQRKRRRITPTSLKDDTVRWHKTGQTKP------VMLNGI----QKGCKKIMVLYKSARKGFK 186

  Fly   442 PSMQNCILND---------------NRSPLDRPLHSMDSEENPPGSATKANGPKAKTLGVSDLEN 491
            |...|.:|:.               ::....:|.....:.:....|..:......||..::.:..
plant   187 PEKSNWVLHQYHLGTEEGEIGEYVVSKITYQQPKQQEKTIDESESSGVRGGPSTPKTSTITQVRP 251

  Fly   492 LNSTEYDDILTFIRYYMFDGHTSYEVEKGLQLYVRGICNLKKHSNRGTERTVGR 545
            :.|.:.|:|       .||..:...::.    |..|:.|:::.|:..|...:.:
plant   252 VISVDEDEI-------AFDDDSKMVLDS----YAEGLENIQEASSGSTSDKIAK 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781
PAE1NP_175788.1 proteasome_alpha_type_5 8..218 CDD:239722 25/160 (16%)
Blue background indicates that the domain is not in the aligned region.

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