DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and PBC1

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_564149.1 Gene:PBC1 / 838776 AraportID:AT1G21720 Length:204 Species:Arabidopsis thaliana


Alignment Length:127 Identity:31/127 - (24%)
Similarity:50/127 - (39%) Gaps:11/127 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GSTVMGLRTNNAIVIGVEKRSVGDLQE-ERMVRKICMLDDHVVMTFSGLTADARILVSRAQMEAQ 94
            ||.|:.:...|...|..::|....||. ....::|..:.|.|.:..|||..|.:.|..|.....:
plant     8 GSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDVQTLYQRLVFRHK 72

  Fly    95 SHRLNFE---KPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLFQTDPSG 153
            .::|..|   ||.|...:...|.     |.:..|  |:....::.|..:|..|.:...|..|
plant    73 LYQLREERDMKPETFASLVSAIL-----YEKRFG--PYLCQPVIAGLGDDDKPFICTMDSIG 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 31/127 (24%)
PBC1NP_564149.1 proteasome_beta_type_3 6..200 CDD:239728 31/127 (24%)

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