DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and PBB2

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_198874.1 Gene:PBB2 / 834056 AraportID:AT5G40580 Length:274 Species:Arabidopsis thaliana


Alignment Length:178 Identity:41/178 - (23%)
Similarity:73/178 - (41%) Gaps:10/178 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 AQEAVRRGSTVMGLRTNNAIVIGVEKRSV-GDLQEERMVRKICMLDDHVVMTFSGLTADARILVS 87
            |...::.|:|::||...:.:::|.:.|:. |.:..::...||..:..::....:|..||...:..
plant    32 APSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTD 96

  Fly    88 RAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLFQTDPS 152
            ....:.:.||....:.:.|  :|. :..||::.....|.  ...:.::||.|..| |||....|.
plant    97 MVSSQLRLHRYQTGRDSRV--VTA-LTLLKKHLFSYQGH--VSAALVLGGVDITG-PHLHTIYPH 155

  Fly   153 GIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHIVRTLVS 200
            |........|.|..|.......|....|.|| .||  .||.:...:.|
plant   156 GSTDTLPFATMGSGSLAAMSVFEAKYKEGLT-RDE--GIKLVAEAICS 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 41/178 (23%)
PBB2NP_198874.1 proteasome_beta_type_7 40..228 CDD:239732 39/170 (23%)

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