DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and PBB1

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_566818.1 Gene:PBB1 / 822364 AraportID:AT3G27430 Length:273 Species:Arabidopsis thaliana


Alignment Length:178 Identity:42/178 - (23%)
Similarity:74/178 - (41%) Gaps:10/178 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 AQEAVRRGSTVMGLRTNNAIVIGVEKRSV-GDLQEERMVRKICMLDDHVVMTFSGLTADARILVS 87
            |...::.|:|::||...:.:::|.:.|:. |.:..::...||..:..::....:|..||...:..
plant    32 APSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTD 96

  Fly    88 RAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLFQTDPS 152
            ....:.:.||....:.:.|  ||. :..||::.....|.  ...:.::||.|..| |||....|.
plant    97 MVSSQLRLHRYQTGRDSRV--ITA-LTLLKKHLFSYQGH--VSAALVLGGVDITG-PHLHTIYPH 155

  Fly   153 GIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHIVRTLVS 200
            |........|.|..|.......|....|.|| .||  .||.:..::.|
plant   156 GSTDTLPFATMGSGSLAAMSVFEAKYKEGLT-RDE--GIKLVAESICS 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 42/178 (24%)
PBB1NP_566818.1 proteasome_beta_type_7 40..228 CDD:239732 40/170 (24%)

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