DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and PAA2

DIOPT Version :9

Sequence 1:NP_001286844.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_178641.1 Gene:PAA2 / 815135 AraportID:AT2G05840 Length:246 Species:Arabidopsis thaliana


Alignment Length:242 Identity:75/242 - (30%)
Similarity:124/242 - (51%) Gaps:18/242 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDRAVTIYSPDGHLLQVEYAQEAVR-RGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLD 68
            |||.:||:||:|.|.|||||.:||: .|.|.:|:|..:::.:..:|:....|.::..|..:..:.
plant     9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSHLFPVT 73

  Fly    69 DHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSC 133
            .::.:..:|:|||:|.||.:|:.||...|..:......:.:.::||...|.|||....||.|:..
plant    74 KYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQHAYMRPLGVVA 138

  Fly   134 LVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHIVRTL 198
            :|.|.||:..|.|::.||:|.||..:|.:.|...|...:::||...|     :.|......|:|.
plant   139 MVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKE-----NPAFTYDETVQTA 198

  Fly   199 VSV------SSLNHTQMEVAVLKYRQPL------RMIDHQVLADLER 233
            :|.      .....|::||.|::...||      ..||..:.|..||
plant   199 ISALQSVLQEDFKATEIEVGVVRADDPLFRSLRTEEIDEHLTAISER 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_001286844.1 arc_protsome_A 5..215 CDD:163366 68/216 (31%)
Ntn_hydrolase 5..214 CDD:294319 67/215 (31%)
PAA2NP_178641.1 proteasome_alpha_type_6 8..220 CDD:239723 67/215 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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