DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and Psmb11

DIOPT Version :9

Sequence 1:NP_001286844.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_780413.1 Gene:Psmb11 / 73902 MGIID:1921152 Length:302 Species:Mus musculus


Alignment Length:228 Identity:50/228 - (21%)
Similarity:86/228 - (37%) Gaps:29/228 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GSTVMGLRTNNAIVIGVEKR-SVGDLQEERMVRKICMLDDHVVMTFSGLTADARILVSRAQMEAQ 94
            |:|.:..|..:.::...:.| |.|........||:..:...::.|.||.:||........:.|.:
Mouse    49 GTTTLAFRFRHGVIAAADTRSSCGSYVACPASRKVIPVHQRLLGTTSGTSADCATWYRVLRRELR 113

  Fly    95 SHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVG----GFDEDGTPHLFQTDPSGIF 155
            ...|...:..:|....:.:|.:...|.        ||...|.    |:|..| |.||.....|..
Mouse   114 LRELREGQLPSVAGTAKLLAAMMSCYR--------GLDLCVATALCGWDHSG-PALFYVYSDGTC 169

  Fly   156 YEWRANTTGRSSQPVRDYMEK--HAD----EILTIADEAAAIKHIV-RTLVSVSSLNHTQMEVAV 213
            .:....:.|..|......:::  |.|    |..|:|  ..|:.|.. |...|..|::...:..:.
Mouse   170 LQGDIFSVGSGSPYAYGVLDRGYHYDMTIQEAYTLA--RCAVAHATHRDAYSGGSVDLFHVRESG 232

  Fly   214 LKYRQPLRMIDHQVL-ADLERTVRREIEDEAEA 245
            .:|   :...|..|| .:|::.  |.:|.|.||
Mouse   233 WEY---VSRSDACVLYRELQKA--RSLEQELEA 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_001286844.1 arc_protsome_A 5..215 CDD:163366 40/195 (21%)
Ntn_hydrolase 5..214 CDD:294319 40/194 (21%)
Psmb11NP_780413.1 20S_bact_beta 48..253 CDD:163402 45/219 (21%)
proteasome_beta_type_5 50..237 CDD:239730 40/200 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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