DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and psmb13a

DIOPT Version :9

Sequence 1:NP_001286844.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_571752.2 Gene:psmb13a / 64280 ZFINID:ZDB-GENE-001208-2 Length:281 Species:Danio rerio


Alignment Length:151 Identity:31/151 - (20%)
Similarity:59/151 - (39%) Gaps:51/151 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EAVRRGSTVMGLRTNNAIVIGVEKRSVGD-LQEERMVRKICMLDDHVVMTFSGLTADARILVSRA 89
            :|::.|:|:.|:...:.:|:|.:.|:..| :..::|..||..:..::....:|..||.       
Zfish    39 KALKTGTTIAGVVFKDGVVLGADTRATSDEVVADKMCAKIHYIAPNIYCCGAGTAADT------- 96

  Fly    90 QMEAQSHRLNFEKPTTVEYITRYIAQLKQN---YTQSNGRRP-------------------FGLS 132
                       ||.|.:         |..|   ::.::||.|                   .|.:
Zfish    97 -----------EKTTDM---------LSSNLTIFSMNSGRNPRVVMAVNIIQDMLFRYHGMIGAN 141

  Fly   133 CLVGGFDEDGTPHLFQTDPSG 153
            .::||.|..|: ||:...|.|
Zfish   142 LILGGVDCTGS-HLYTVGPYG 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_001286844.1 arc_protsome_A 5..215 CDD:163366 31/151 (21%)
Ntn_hydrolase 5..214 CDD:294319 31/151 (21%)
psmb13aNP_571752.2 proteasome_beta_type_7 45..233 CDD:239732 29/145 (20%)
Pr_beta_C 241..272 CDD:315191
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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