DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and psmb13a

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_571752.2 Gene:psmb13a / 64280 ZFINID:ZDB-GENE-001208-2 Length:281 Species:Danio rerio


Alignment Length:151 Identity:31/151 - (20%)
Similarity:59/151 - (39%) Gaps:51/151 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EAVRRGSTVMGLRTNNAIVIGVEKRSVGD-LQEERMVRKICMLDDHVVMTFSGLTADARILVSRA 89
            :|::.|:|:.|:...:.:|:|.:.|:..| :..::|..||..:..::....:|..||.       
Zfish    39 KALKTGTTIAGVVFKDGVVLGADTRATSDEVVADKMCAKIHYIAPNIYCCGAGTAADT------- 96

  Fly    90 QMEAQSHRLNFEKPTTVEYITRYIAQLKQN---YTQSNGRRP-------------------FGLS 132
                       ||.|.:         |..|   ::.::||.|                   .|.:
Zfish    97 -----------EKTTDM---------LSSNLTIFSMNSGRNPRVVMAVNIIQDMLFRYHGMIGAN 141

  Fly   133 CLVGGFDEDGTPHLFQTDPSG 153
            .::||.|..|: ||:...|.|
Zfish   142 LILGGVDCTGS-HLYTVGPYG 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 31/151 (21%)
psmb13aNP_571752.2 proteasome_beta_type_7 45..233 CDD:239732 29/145 (20%)
Pr_beta_C 241..272 CDD:463597
Blue background indicates that the domain is not in the aligned region.

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