DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and psmb12

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_571751.1 Gene:psmb12 / 64279 ZFINID:ZDB-GENE-001208-1 Length:217 Species:Danio rerio


Alignment Length:205 Identity:40/205 - (19%)
Similarity:78/205 - (38%) Gaps:38/205 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 YAQ-EAVRRGSTVMGLRTNNAIVIGVEKR-SVGD-LQEERMVRKICMLDDHVVMTFSGLTADARI 84
            |:| ..|..|:|::.::.|..::||.:.| |:|: ....:.:.|:..:.|.:....:|..|||:.
Zfish     7 YSQVNGVSTGTTILAVKFNGGVIIGSDSRASMGESYVSSKTINKLIQVHDRIFCCIAGSLADAQA 71

  Fly    85 LVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLFQT 149
            :...|:.:...|.:..|.|..|    :..|.:.:....|| :.......:..|:|....|.::..
Zfish    72 VTKMAKFQLSFHSIQMESPPLV----KAAASIMRELCYSN-KEELRAGFITAGWDRKKGPQIYVV 131

  Fly   150 DPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEA-------------------------- 188
            ...|:.........|..|..:..|::......:|: :||                          
Zfish   132 SLGGMLLSQPFTIGGSGSTYIYGYVDAKFKPDMTL-EEATQFSTNALALAMGRDNVSGGVVHLVV 195

  Fly   189 ---AAIKHIV 195
               |.:||||
Zfish   196 ITEAGVKHIV 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 40/205 (20%)
psmb12NP_571751.1 proteasome_beta_type_6 17..205 CDD:239731 34/193 (18%)

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