DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and psmb3

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001123295.1 Gene:psmb3 / 573095 ZFINID:ZDB-GENE-040426-2682 Length:205 Species:Danio rerio


Alignment Length:122 Identity:24/122 - (19%)
Similarity:48/122 - (39%) Gaps:15/122 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GSTVMGLRTNNAIVIGVEKRSVGDLQEERMV---RKICMLDDHVVMTFSGLTADARILVSRAQME 92
            |..||.:|....:.|..::|.  .:|.:.:.   :||..:.:.:.:..:||..|.:.:..|.:. 
Zfish     8 GGAVMAMRGKECVAIASDRRF--GIQAQLVTTDFQKIFPMGERLYIGLAGLATDVQTVSQRLKF- 69

  Fly    93 AQSHRLN-FEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLFQ 148
                ||| :|.....:...|....:..|........|:.:..::.|.|    |..|:
Zfish    70 ----RLNLYELKEGRQIKPRTFMSMVSNLLYERRFGPYYIEPVIAGLD----PKTFE 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 24/122 (20%)
psmb3NP_001123295.1 proteasome_beta_type_3 6..201 CDD:239728 24/122 (20%)

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