DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and PSMA6

DIOPT Version :9

Sequence 1:NP_001286844.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_002782.1 Gene:PSMA6 / 5687 HGNCID:9535 Length:246 Species:Homo sapiens


Alignment Length:238 Identity:67/238 - (28%)
Similarity:123/238 - (51%) Gaps:10/238 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDRAVTIYSPDGHLLQVEYAQEAVRRGS-TVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLD 68
            :||.:||:||:|.|.|||||.:|:.:|. |.:.:|..:..||..:|:....|.:...|..:..:.
Human     9 FDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKIT 73

  Fly    69 DHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSC 133
            :::....:|:|||:|..|.||:.||.:.:..:.....|:.:.:.||.:.|.|||:...||.|...
Human    74 ENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCM 138

  Fly   134 LVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHIVRTL 198
            ::.|.||:..|.:::.||:|.:..::|...|........::||...:......| ..::..:..|
Human   139 ILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFE-QTVETAITCL 202

  Fly   199 VSVSSLNH--TQMEVAVLKYRQP-LRM-----IDHQVLADLER 233
            .:|.|::.  :::||.|:....| .|:     ||..::|..||
Human   203 STVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLVALAER 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_001286844.1 arc_protsome_A 5..215 CDD:163366 60/212 (28%)
Ntn_hydrolase 5..214 CDD:294319 59/211 (28%)
PSMA6NP_002782.1 proteasome_alpha_type_6 8..220 CDD:239723 59/211 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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