DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and psma3

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001025358.1 Gene:psma3 / 564370 ZFINID:ZDB-GENE-050913-120 Length:255 Species:Danio rerio


Alignment Length:248 Identity:83/248 - (33%)
Similarity:131/248 - (52%) Gaps:12/248 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLDD 69
            ||.:.:.:||||.:.|||||.:||...||.:|:|..:.:|.||||..:..|.||...::|..:|.
Zfish     8 YDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRIFNIDR 72

  Fly    70 HVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCL 134
            ||.|..:||.||||.|...|:.||.|.|.|:.....::::...:|.....||..:..||||.|.:
Zfish    73 HVGMAVAGLLADARSLSEVAREEASSFRSNYGHDIPLKHLADRVAMYVHAYTLYSAVRPFGCSFI 137

  Fly   135 VGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILT---IADEAAAIKHIVR 196
            :|.:|||..|.|:..|||||.|.:.....|::.|..:..:||...:.:|   :..|.|.|.:||.
Zfish   138 LGSYDEDDGPQLYMVDPSGIAYGYWGCAIGKAKQAAKTEIEKLQMKDMTCRELVKEVAKIIYIVH 202

  Fly   197 TLVSVSSLNHTQMEVA----VLKYRQPLRMIDHQVLADLERTVRREIEDEAEA 245
            ..|...:.   ::|::    |.|.|..|  :...|..:.|:..:..:|:|.::
Zfish   203 DEVKDKAF---ELELSWVGEVTKGRHEL--VPKDVKEEAEKYAKESLEEEDDS 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 75/215 (35%)
psma3NP_001025358.1 proteasome_alpha_type_3 5..217 CDD:239720 75/211 (36%)

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