DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha4T2 and psma2

DIOPT Version :9

Sequence 1:NP_001286844.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001016382.1 Gene:psma2 / 549136 XenbaseID:XB-GENE-964711 Length:234 Species:Xenopus tropicalis


Alignment Length:244 Identity:81/244 - (33%)
Similarity:133/244 - (54%) Gaps:19/244 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAQR-YDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKI 64
            ||:| |..::|.:||.|.|:|:|||..||..|:..:|::..|.:|:..||:....|.:|:...|:
 Frog     1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKATNGVVLATEKKQKSILYDEQSAHKV 65

  Fly    65 CMLDDHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPF 129
            ..:..|:.|.:||:..|.|:||.||:..||.:.|.:::|.....:.:.:|.:.|.||||.|.|||
 Frog    66 EPITKHIGMVYSGMGPDYRVLVRRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPF 130

  Fly   130 GLSCLVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHI 194
            |:|.|:.|:|| |.|:|||:||||.::.|:|...|::....:.::||..:|.|.:.|   ||...
 Frog   131 GVSLLIAGWDE-GRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELED---AIHTA 191

  Fly   195 VRTLVS--VSSLNHTQMEVAVLKYRQPLRMIDHQVLADLERTVRREIED 241
            :.||..  ...:....:||.:...            |..:|....|::|
 Frog   192 ILTLKESFEGQMTEDNIEVGICNE------------AGFKRLTPAEVKD 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_001286844.1 arc_protsome_A 5..215 CDD:163366 74/211 (35%)
Ntn_hydrolase 5..214 CDD:294319 74/210 (35%)
psma2NP_001016382.1 proteasome_alpha_type_2 6..231 CDD:239719 78/239 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.