DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and psma1

DIOPT Version :9

Sequence 1:NP_001286844.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001008159.1 Gene:psma1 / 493521 XenbaseID:XB-GENE-995831 Length:261 Species:Xenopus tropicalis


Alignment Length:251 Identity:85/251 - (33%)
Similarity:137/251 - (54%) Gaps:16/251 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RYDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLD 68
            :||..||::||.|.:.|:|||.|||::||..:||::.:..|:...||:..:|...:  :||..:|
 Frog     5 QYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKSQAVLVALKRAQSELAAHQ--KKILNVD 67

  Fly    69 DHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSC 133
            :||.::.:|||||||:|.:..:.|....|..|::|..|..:...|....|..||..||||:|:..
 Frog    68 NHVGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSQIGSKTQIPTQRYGRRPYGVGL 132

  Fly   134 LVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEIL--TIADEAAAIKHIVR 196
            |:.|:|:.| ||:|||.||..:::.||.:.|..||..|.|:|:|..|.|  .:.|   .:||.:|
 Frog   133 LIAGYDDMG-PHIFQTSPSANYFDCRAMSIGARSQSARTYLERHMSEFLDCNLND---LVKHGLR 193

  Fly   197 ----TLVSVSSLNHTQMEVAVLKYRQPLRMIDHQVLA----DLERTVRREIEDEAE 244
                ||.:...|....:.:.::.......:.|...:|    .||...:|::...||
 Frog   194 ALRETLPAEQDLTTKNVSIGIVGKEMEFTIYDDDEVAPFLEGLEERPQRKVAPPAE 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_001286844.1 arc_protsome_A 5..215 CDD:163366 78/215 (36%)
Ntn_hydrolase 5..214 CDD:294319 78/214 (36%)
psma1NP_001008159.1 proteasome_alpha_type_1 6..216 CDD:239718 78/215 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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