DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and Prosbeta5

DIOPT Version :9

Sequence 1:NP_001286844.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_652014.1 Gene:Prosbeta5 / 45269 FlyBaseID:FBgn0029134 Length:282 Species:Drosophila melanogaster


Alignment Length:180 Identity:37/180 - (20%)
Similarity:71/180 - (39%) Gaps:53/180 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GSTVMGLRTNNAIVIGVEKRSV-GDLQEERMVRKICMLDDHVVMTFSGLTADA----RILVSRAQ 90
            |:|.:|.:....:::.|:.|:. |.....:.::||..::..::.|.:|..||.    |:|    .
  Fly    73 GTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEINQFMLGTLAGGAADCVYWDRVL----S 133

  Fly    91 MEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLS--CLVGGFDEDGTPHLFQTD--- 150
            .|.:.|.|..::..:|...::.:|.:...|      :..|||  .::.|:|:.| |.|:..|   
  Fly   134 KECRLHELRNKERISVAAASKIMANIAHEY------KGMGLSMGMMLAGYDKRG-PGLYYVDSEG 191

  Fly   151 ---PSGIF----------------YEWRANTTGRSSQPVRDYMEKHADEI 181
               |..:|                |.|             |..:|.|.|:
  Fly   192 SRTPGNLFSVGSGSLYAYGVLDSGYHW-------------DLEDKEAQEL 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_001286844.1 arc_protsome_A 5..215 CDD:163366 37/180 (21%)
Ntn_hydrolase 5..214 CDD:294319 37/180 (21%)
Prosbeta5NP_652014.1 PTZ00488 38..272 CDD:185666 37/180 (21%)
proteasome_beta_type_5 74..261 CDD:239730 36/179 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440925
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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