DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and psma1

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001003427.1 Gene:psma1 / 445033 ZFINID:ZDB-GENE-040801-15 Length:262 Species:Danio rerio


Alignment Length:258 Identity:84/258 - (32%)
Similarity:138/258 - (53%) Gaps:15/258 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RYDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLD 68
            :||..||::||.|.:.|:|||.|||::||..:||::::..|:...||:..:|...:  :||..:|
Zfish     5 QYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSHSHAVLVALKRAQSELAAHQ--KKILHVD 67

  Fly    69 DHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSC 133
            :|:.::.:|||||||:|.:..:.|....|..|::|..|..:...|....|..||..||||:|:..
Zfish    68 NHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGL 132

  Fly   134 LVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHIVR-- 196
            |:.|:|:.| ||:|||.||..:::.:|.:.|..||..|.|:|:|. |.....:..|.::|.:|  
Zfish   133 LIAGYDDMG-PHIFQTCPSANYFDCKAMSIGARSQSARTYLERHM-EAFNDCNLNALVQHGLRAL 195

  Fly   197 --TLVSVSSLNHTQMEVAVLKYRQPLRMIDHQVLADL-----ERTVRREIEDEAEASRRPRAP 252
              ||.:...|....:.:.::.......:.|...:|..     ||..||......||:  |..|
Zfish   196 RETLPAEQDLTTKNVSIGIVGKDMEFTIYDDDDVATFLQGLEERPQRRVALPADEAA--PAVP 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 74/212 (35%)
psma1NP_001003427.1 proteasome_alpha_type_1 6..216 CDD:239718 74/213 (35%)

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