DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and psma6b

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001002589.1 Gene:psma6b / 436862 ZFINID:ZDB-GENE-040718-329 Length:246 Species:Danio rerio


Alignment Length:231 Identity:64/231 - (27%)
Similarity:122/231 - (52%) Gaps:8/231 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDRAVTIYSPDGHLLQVEYAQEAVRRGS-TVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLD 68
            :||.:||:||:|.|.|||||.:|:.:|. |.:.:|..:..::..:|:....|.:...|..:..:.
Zfish     9 FDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAIVVTQKKVPDKLLDSSTVTHLFRIT 73

  Fly    69 DHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSC 133
            :::....||:|||:|..|.||:.||.:.:..:.....|:.:.:.||.:.|.|||:...||.|...
Zfish    74 ENIGCVMSGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCM 138

  Fly   134 LVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHIVRTL 198
            :|.|.||:..|.:::.||:|.:..::|...|........::||...:.|....| .|::..:..|
Zfish   139 IVIGLDEELGPQVYKCDPAGYYCGFKATAAGVKQTEATSFLEKKVKKKLDWTFE-QAVETAITCL 202

  Fly   199 VSVSSLNH--TQMEVAVLKYRQPLRMIDHQVLADLE 232
            .:|.|::.  :::|:.|:....|    ..::|::.|
Zfish   203 TTVLSIDFKPSELEIGVITAEDP----KFRILSESE 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 60/211 (28%)
psma6bNP_001002589.1 proteasome_alpha_type_6 8..220 CDD:239723 60/211 (28%)

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