DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and Psma3l

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001004094.1 Gene:Psma3l / 408248 RGDID:1598236 Length:255 Species:Rattus norvegicus


Alignment Length:248 Identity:76/248 - (30%)
Similarity:128/248 - (51%) Gaps:12/248 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLDD 69
            ||.:.:.:||||.:.|||||.:||...||.:|:|..:.:|.||||..:..|.||...:::..:|.
  Rat     8 YDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDR 72

  Fly    70 HVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCL 134
            ||.|..:||.||||.|...|:.||.:.|.||.....::::...:|.....||..:..||||.|.:
  Rat    73 HVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFM 137

  Fly   135 VGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIAD---EAAAIKHIVR 196
            :|.:..:....|:..||||:.|.:.....|::.|..:..:||...:.:|..|   |.|.|.:||.
  Rat   138 LGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKIIYIVH 202

  Fly   197 TLVSVSSLNHTQMEVA----VLKYRQPLRMIDHQVLADLERTVRREIEDEAEA 245
            ..|...:.   ::|::    :.|.|.  .::...|..:.|:..:..:::|.|:
  Rat   203 DEVKDKAF---ELELSWVGELTKGRH--EIVPKDVREEAEKYAKESLKEEDES 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 70/215 (33%)
Psma3lNP_001004094.1 proteasome_alpha_type_3 5..217 CDD:239720 70/211 (33%)

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