DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and psma5

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_991271.1 Gene:psma5 / 403011 ZFINID:ZDB-GENE-040625-96 Length:241 Species:Danio rerio


Alignment Length:238 Identity:81/238 - (34%)
Similarity:132/238 - (55%) Gaps:11/238 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLDD 69
            |||.|..:||:|.|.|||||.||::.|||.:|::|:..:.:.||||....|.|...:.||..:|.
Zfish     8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDS 72

  Fly    70 HVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNG-----RRPF 129
            |:....|||.|||:.|:.:|::|.|:|...:.:..|||.:|:.::.|...:.:.:.     .|||
Zfish    73 HIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPF 137

  Fly   130 GLSCLVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHI 194
            |::.|.||.||.| |.|:..||||.|.:..|...|.:|:..:..:::...:.:|:.|   |||..
Zfish   138 GVALLFGGVDEKG-PQLYHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKD---AIKSS 198

  Fly   195 VRTLVSV--SSLNHTQMEVAVLKYRQPLRMIDHQVLADLERTV 235
            :..|..|  ..||.|.:|:|.::..:...|...:.|.|:.:.:
Zfish   199 LTILKQVMEEKLNATNIELATVEPGKTFHMYTKEELEDVIKDI 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 78/215 (36%)
psma5NP_991271.1 proteasome_alpha_type_5 8..220 CDD:239722 78/215 (36%)

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