DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and psma5

DIOPT Version :9

Sequence 1:NP_001286844.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_991271.1 Gene:psma5 / 403011 ZFINID:ZDB-GENE-040625-96 Length:241 Species:Danio rerio


Alignment Length:238 Identity:81/238 - (34%)
Similarity:132/238 - (55%) Gaps:11/238 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLDD 69
            |||.|..:||:|.|.|||||.||::.|||.:|::|:..:.:.||||....|.|...:.||..:|.
Zfish     8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDS 72

  Fly    70 HVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNG-----RRPF 129
            |:....|||.|||:.|:.:|::|.|:|...:.:..|||.:|:.::.|...:.:.:.     .|||
Zfish    73 HIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPF 137

  Fly   130 GLSCLVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHI 194
            |::.|.||.||.| |.|:..||||.|.:..|...|.:|:..:..:::...:.:|:.|   |||..
Zfish   138 GVALLFGGVDEKG-PQLYHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKD---AIKSS 198

  Fly   195 VRTLVSV--SSLNHTQMEVAVLKYRQPLRMIDHQVLADLERTV 235
            :..|..|  ..||.|.:|:|.::..:...|...:.|.|:.:.:
Zfish   199 LTILKQVMEEKLNATNIELATVEPGKTFHMYTKEELEDVIKDI 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_001286844.1 arc_protsome_A 5..215 CDD:163366 78/216 (36%)
Ntn_hydrolase 5..214 CDD:294319 78/215 (36%)
psma5NP_991271.1 proteasome_alpha_type_5 8..220 CDD:239722 78/215 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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