DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and psma6

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_989113.1 Gene:psma6 / 394718 XenbaseID:XB-GENE-943786 Length:246 Species:Xenopus tropicalis


Alignment Length:238 Identity:68/238 - (28%)
Similarity:124/238 - (52%) Gaps:10/238 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDRAVTIYSPDGHLLQVEYAQEAVRRGS-TVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLD 68
            :||.:||:||:|.|.|||||.:|:.:|. |.:.:|..:..|:..:::....|.:...|..:..:.
 Frog     9 FDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVVTQRKVPDKLLDSNTVTHLFRIT 73

  Fly    69 DHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSC 133
            :.:....:|:|||:|..|.||:.||.:.:..:.....|:.:.:.||.:.|.|||:...||.|...
 Frog    74 ESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCM 138

  Fly   134 LVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHIVRTL 198
            ::.|.||:..|.:|:.||:|.:..::|.|.|........::||...:.|....| ..::..:..|
 Frog   139 ILIGVDEENGPQVFKCDPAGYYCGFKATTAGVKQTEATSFLEKKVKKKLDWTYE-QTLETAISCL 202

  Fly   199 VSVSSLNH--TQMEVAVLKYRQP-LRM-----IDHQVLADLER 233
            .:|.|::.  :::||.|:....| .|:     ||..::|..||
 Frog   203 STVLSIDFKPSELEVGVVTVEDPKFRVLTEAEIDVHLVALAER 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 60/211 (28%)
psma6NP_989113.1 proteasome_alpha_type_6 8..220 CDD:239723 60/211 (28%)

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