DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha4T2 and psma4

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_999862.1 Gene:psma4 / 326687 ZFINID:ZDB-GENE-040426-1932 Length:261 Species:Danio rerio


Alignment Length:253 Identity:81/253 - (32%)
Similarity:141/253 - (55%) Gaps:10/253 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAQRYDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMV-RKI 64
            |::|||...||:||:|.|.|||||.||:....|.:|:..|:.:::..|:|::..|.:|... .||
Zfish     1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKI 65

  Fly    65 CMLDDHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPF 129
            ..|::.:..:.:|:|:||.:|.:..::.||.:.|.:::|...|.:...:..:||.|||..|:|||
Zfish    66 YKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPF 130

  Fly   130 GLSCLVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPV-----RDYMEKHADEILTIADEAA 189
            |:|.|..|:|:.....|:|:||||.:..|:|...|.:|...     :||.|   .|:...|..|.
Zfish   131 GVSLLYMGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKE---GEMTLSAALAL 192

  Fly   190 AIKHIVRTLVSVSSLNHTQMEVAVLKYRQPLRMIDHQVLADLERTVRREIEDEAEASR 247
            |:|.:.:|: .||.|:..::|:|.|........|......::|..:::...:||:|.:
Zfish   193 AVKVLNKTM-DVSKLSAEKVEIATLTRENGKTKIKVLKQKEVEELIKKHEAEEAKAEK 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 73/214 (34%)
psma4NP_999862.1 proteasome_alpha_type_4 3..216 CDD:239721 74/216 (34%)

Return to query results.
Submit another query.