DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and Psmb10

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001020808.1 Gene:Psmb10 / 291983 RGDID:1307428 Length:273 Species:Rattus norvegicus


Alignment Length:164 Identity:38/164 - (23%)
Similarity:69/164 - (42%) Gaps:9/164 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 AVRRGSTVMGLRTNNAIVIGVEKRSVGD-LQEERMVRKICMLDDHVVMTFSGLTADARILVSRAQ 90
            |.:.|:|:.||...:.:::|.:.|:..| :..::...||..:...:....:|:.||..:....|.
  Rat    35 ARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAA 99

  Fly    91 MEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLFQTDPSGIF 155
            .:.:.|.|:..:...|..:||.:.|....|     :...|.|.:|||.|.:| |.|:...|.|.:
  Rat   100 SKMELHALSTGREPRVATVTRILRQTLFRY-----QGHVGASLIVGGVDLNG-PQLYSVHPHGSY 158

  Fly   156 YEWRANTTGRSSQPVRDYMEKHADEILTIADEAA 189
            ........|.........:|......:|:  |||
  Rat   159 SRLPFTALGSGQDAAVALLEDRFQPNMTL--EAA 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 38/164 (23%)
Psmb10NP_001020808.1 proteasome_beta_type_7 40..226 CDD:239732 36/159 (23%)
Pr_beta_C 231..267 CDD:463597
Blue background indicates that the domain is not in the aligned region.

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