DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and Psmb2

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_036100.3 Gene:Psmb2 / 26445 MGIID:1347045 Length:201 Species:Mus musculus


Alignment Length:135 Identity:24/135 - (17%)
Similarity:53/135 - (39%) Gaps:37/135 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 VMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLDDH---------VVMTFSGLTADARILVSRA 89
            ::|::..:.:::..::.:..::        :.|.|||         :::...|...|........
Mouse     4 LIGIQGPDYVLVASDRVAASNI--------VQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYI 60

  Fly    90 QMEAQSHRL--NFE-KPTTVEYITRYIAQLKQNYTQSN------GRRPFGLSCLVGGFDEDGTPH 145
            |...|.:::  .:| .||..           .|:|:.|      .|.|:.::.|:.|:||...|.
Mouse    61 QKNVQLYKMRNGYELSPTAA-----------ANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPA 114

  Fly   146 LFQTD 150
            |:..|
Mouse   115 LYYMD 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 24/135 (18%)
Psmb2NP_036100.3 proteasome_beta_type_2 1..192 CDD:239727 24/135 (18%)

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