DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and Psma6

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_036098.1 Gene:Psma6 / 26443 MGIID:1347006 Length:246 Species:Mus musculus


Alignment Length:238 Identity:67/238 - (28%)
Similarity:122/238 - (51%) Gaps:10/238 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDRAVTIYSPDGHLLQVEYAQEAVRRGS-TVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLD 68
            :||.:||:||:|.|.|||||.:|:.:|. |.:.:|..:..||..:|:....|.:...|..:..:.
Mouse     9 FDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKIT 73

  Fly    69 DHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSC 133
            :.:....:|:|||:|..|.||:.||.:.:..:.....|:.:.:.||.:.|.|||:...||.|...
Mouse    74 ESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCM 138

  Fly   134 LVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHIVRTL 198
            ::.|.||:..|.:::.||:|.:..::|...|........::||...:......| ..::..:..|
Mouse   139 ILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFE-QTVETAITCL 202

  Fly   199 VSVSSLNH--TQMEVAVLKYRQP-LRM-----IDHQVLADLER 233
            .:|.|::.  :::||.|:....| .|:     ||..::|..||
Mouse   203 STVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLVALAER 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 59/211 (28%)
Psma6NP_036098.1 proteasome_alpha_type_6 8..220 CDD:239723 59/211 (28%)

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