DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and Psma1

DIOPT Version :9

Sequence 1:NP_001286844.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_036095.1 Gene:Psma1 / 26440 MGIID:1347005 Length:263 Species:Mus musculus


Alignment Length:261 Identity:86/261 - (32%)
Similarity:138/261 - (52%) Gaps:20/261 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RYDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLD 68
            :||..||::||.|.:.|:|||.|||::||..:||::....|:...||:..:|...:  :||..:|
Mouse     5 QYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ--KKILHVD 67

  Fly    69 DHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSC 133
            :|:.::.:|||||||:|.:..:.|....|..|::|..|..:...|....|..||..||||:|:..
Mouse    68 NHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGL 132

  Fly   134 LVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTI-ADEAAAIKHIVR- 196
            |:.|:|:.| ||:|||.||..:::.||.:.|..||..|.|:|:|..|.:.. .||  .:||.:| 
Mouse   133 LIAGYDDMG-PHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLDE--LVKHGLRA 194

  Fly   197 ---TLVSVSSLNHTQMEVAVLKYRQPLRMIDHQ----VLADLERTVRRE------IEDEAEASRR 248
               ||.:...|....:.:.::.......:.|..    .|..||...:|:      .|:.||.:..
Mouse   195 LRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLDGLEERPQRKAQPSQAAEEPAEKADE 259

  Fly   249 P 249
            |
Mouse   260 P 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_001286844.1 arc_protsome_A 5..215 CDD:163366 77/214 (36%)
Ntn_hydrolase 5..214 CDD:294319 77/213 (36%)
Psma1NP_036095.1 proteasome_alpha_type_1 6..216 CDD:239718 77/214 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 232..263 8/29 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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