DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and pup2

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_594372.1 Gene:pup2 / 2543205 PomBaseID:SPAC323.02C Length:247 Species:Schizosaccharomyces pombe


Alignment Length:240 Identity:79/240 - (32%)
Similarity:134/240 - (55%) Gaps:11/240 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLDD 69
            |||.|..:||:|.|.|||||.||::.|||.:|::|.:|:|:|||||....|.|...|.|:..:|.
pombe     8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLMESHSVEKLFEIDS 72

  Fly    70 HVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNG------RRP 128
            |:....||||||||.::..|:::.|:||..:::|..:|..|:.|..|...:.:...      .||
pombe    73 HIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRP 137

  Fly   129 FGLSCLVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKH 193
            ||::.|:.|.||.| |.|:.::|||.::.:.|...|..|:|.:..:.|...:.:|:.:....|..
pombe   138 FGVALLIAGIDEHG-PQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKEFHKDMTLEEAEVLILK 201

  Fly   194 IVRTLVSVSSLNHTQMEVAVLKYRQPLRMIDHQVLADLERTVRRE 238
            ::|.::. ..|:...:::|.:.......:.:.:.:||   .|.||
pombe   202 VLRQVME-EKLDSKNVQLAKVTAEGGFHIYNDEEMAD---AVARE 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 74/214 (35%)
pup2NP_594372.1 proteasome_alpha_type_5 8..221 CDD:239722 74/214 (35%)

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