DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and scl1

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_595374.1 Gene:scl1 / 2541139 PomBaseID:SPBC646.16 Length:244 Species:Schizosaccharomyces pombe


Alignment Length:241 Identity:60/241 - (24%)
Similarity:120/241 - (49%) Gaps:4/241 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AQRYDRAVTIYSPDGHLLQVEYAQEAVRR-GSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKIC 65
            |:.:||.:|::||:|.|.|||||.:|... |.|.:|:...|...:..:|:....|.:...|:.:.
pombe     4 ARGFDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKHVF 68

  Fly    66 MLDDHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFG 130
            .:...:....:|..||||..||||:.||.........|...:.:.:.:|.:.|..||....||.|
pombe    69 PITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAMRPLG 133

  Fly   131 LSCLVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHIV 195
            ::..:...|::..|.||:.||:|.:..::|.:.|.......:::||...:....::....::..:
pombe   134 VAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDGIPSNLTDTVETGI 198

  Fly   196 RTLVSVSS--LNHTQMEVAVLKYRQPLRMID-HQVLADLERTVRRE 238
            :.|:|..|  ...|::::.|::..:|.|::. .::.|.|:....::
pombe   199 QALMSSLSTDFKSTELQIGVVEDDKPFRVLSVEEIEAHLQSIAEKD 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 54/211 (26%)
scl1NP_595374.1 proteasome_alpha_type_6 6..219 CDD:239723 54/212 (25%)

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