DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and Psma2

DIOPT Version :9

Sequence 1:NP_001286844.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_032970.2 Gene:Psma2 / 19166 MGIID:104885 Length:234 Species:Mus musculus


Alignment Length:199 Identity:75/199 - (37%)
Similarity:122/199 - (61%) Gaps:5/199 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAQR-YDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKI 64
            ||:| |..::|.:||.|.|:|:|||..||..|:..:|::..|.:|:..||:....|.:||.|.|:
Mouse     1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKV 65

  Fly    65 CMLDDHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPF 129
            ..:..|:.:.:||:..|.|:||.||:..||.:.|.:::|.....:.:.:|.:.|.||||.|.|||
Mouse    66 EPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPF 130

  Fly   130 GLSCLVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHI 194
            |:|.|:.|::| |.|:|||:||||.::.|:|...|::....:.::||..:|.|.:.|   ||...
Mouse   131 GVSLLICGWNE-GRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELED---AIHTA 191

  Fly   195 VRTL 198
            :.||
Mouse   192 ILTL 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_001286844.1 arc_protsome_A 5..215 CDD:163366 72/194 (37%)
Ntn_hydrolase 5..214 CDD:294319 72/194 (37%)
Psma2NP_032970.2 proteasome_alpha_type_2 6..231 CDD:239719 72/194 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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