DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and pas-1

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_506571.1 Gene:pas-1 / 179941 WormBaseID:WBGene00003922 Length:246 Species:Caenorhabditis elegans


Alignment Length:221 Identity:60/221 - (27%)
Similarity:109/221 - (49%) Gaps:20/221 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDRAVTIYSPDGHLLQVEYAQEAVRRGS-TVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLD 68
            :||.:||:||:|.:.|||||.:|:...: |.:.::..:|.||.|:||....|.....|..:..:.
 Worm     9 FDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQIS 73

  Fly    69 DHVVMTFSGLTADARILVSRAQMEAQS--HRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGL 131
            ..|.....|:..||:..:.|||.||.|  ::..::.|  .|.:.:.:|.|.|.|||:...|..|.
 Worm    74 QSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMP--CELLAKKMADLNQYYTQNAEMRSLGC 136

  Fly   132 SCLVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKH--------ADEILTIADEA 188
            :.|...:|::..|.:::.||:|.:...:..:.|....|...::||.        :.|.:.:|.||
 Worm   137 ALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEA 201

  Fly   189 AAIKHIVRTLVSVSSLNHTQMEVAVL 214
                  ::|.:.: .:....:||.|:
 Worm   202 ------LQTSLGI-DVRSKDLEVVVV 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 59/219 (27%)
pas-1NP_506571.1 proteasome_alpha_type_6 8..220 CDD:239723 59/219 (27%)

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