DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and pas-6

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_504472.1 Gene:pas-6 / 178943 WormBaseID:WBGene00003927 Length:260 Species:Caenorhabditis elegans


Alignment Length:252 Identity:80/252 - (31%)
Similarity:127/252 - (50%) Gaps:20/252 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RYDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLD 68
            :||..||::||.|.|.|||||.||:::||..:|:::....||...||:..||...:  :|:..:|
 Worm     5 QYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSHQ--KKVYEID 67

  Fly    69 DHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLK-QNYTQSNGRRPFGLS 132
            .|..::.:||.:|.|||....|.|..|.|.::::...::.:...: ||| |..||..||||||:.
 Worm    68 THAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESM-QLKLQANTQYYGRRPFGVG 131

  Fly   133 CLVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHIVR- 196
            .|:.|:|:||. |:.|||||.........:.|..||..|.|:|::.|.......|...:..::. 
 Worm   132 ILIAGYDKDGA-HIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDNFEKSTPEQLIVHALLAL 195

  Fly   197 --TLVSVSSLNHTQMEVAVLKYRQPLRMI-DHQVLADLERTVRREIEDEAEASRRPR 250
              ||.:..:||.....:.::....|..:: |.||...|.           :.|..||
 Worm   196 RDTLPAEENLNAQNTSIGIVGKDSPFSLLEDAQVAVHLN-----------QVSTHPR 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 72/212 (34%)
pas-6NP_504472.1 proteasome_alpha_type_1 6..216 CDD:239718 72/213 (34%)

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