DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and pas-3

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001379751.1 Gene:pas-3 / 172139 WormBaseID:WBGene00003924 Length:250 Species:Caenorhabditis elegans


Alignment Length:252 Identity:83/252 - (32%)
Similarity:141/252 - (55%) Gaps:15/252 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAQRYDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEER-MVRKI 64
            ||:|||...||:||:|.|.|||||.||:....|.:|:.::..||:..|:::|..|.::. |..|:
 Worm     1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEKV 65

  Fly    65 CMLDDHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPF 129
            ..|.|::..|.:|:||||.||::..:..|.|:|.::.:...||.:.:.:...||.|||..|:|||
 Worm    66 YRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPF 130

  Fly   130 GLSCLVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPV-----RDYMEKHADEILTIADEAA 189
            |:|.|..|:|:.....|:|:||||.:..|:|...|.:.|..     ::|...:.:|.     :..
 Worm   131 GVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYKSPNLEEA-----KQL 190

  Fly   190 AIKHIVRTL-VSVSSLNHTQMEVAVLKYRQPLRMIDHQVLADLERTVRREIEDEAEA 245
            |||.:.:|| |.::|   .::|:|||..|....:::.....:::..:....:.|.||
 Worm   191 AIKVLWKTLDVKLAS---EKVEMAVLTRRDGKTVLEELTTKEVDALIAEHEKKEKEA 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 74/215 (34%)
pas-3NP_001379751.1 proteasome_alpha_type_4 3..213 CDD:239721 75/217 (35%)

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